MITgcm Model Run

Model Run phase of the AquaINFRA marine modeling chain. A simulation for the Catalan marine model is run, using the MITgcm modeling code, for the selected time period. Inputs are initial and boundary conditions files and atmospheric forcing files (output from the Preprocessing phase), bathymetry and configured namelists. Outputs are 3D timeseries of sea temperature, salinity, currents and sea surface height.

AquaINFRA catalunya use case MITgcm

Inputs
Id Title Data Type Description
preprocessing_output_directory preprocessing_output_directory string Link to the directory containing the preprocessing output to use as input for the model run
Outputs
Id Title Description
zipped_output_files NetCDF outputs (zipped) Zip file of the NetCDF files resulting from the model simulation
netcdf_output_files NetCDF outputs (not zipped) Directory containing the simulation results in NetCDF files for each of the output variables: temperature (T), salinity (S), sea currents(U, V, W) and sea surface height(Eta)
log_file Log file RUN_MODEL.log Model run log file
model_stderr Log file STDERR Model run log file STDERR.0000
model_stdout Log file STDOUT Model run log file STDOUT.0000
bathymetry Bathymetry file Bathymetry file: bathy_interCATSEA_lowres.nc
depths Depths file Depths file: depths.dat
river_discharges River discharges file River discharges CSV file: river_discharges_M3000L015.csv
configure_inc Configure.inc file Configure.inc file

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Execution modes

  • Synchronous
  • Asynchronous