Reproducing HEAT HOLAS results: Combine the samples
Combine the various types of samples to be used for reproducing the HOLAS assessment using HELCOM's HEAT assessment tool, for a selected HOLAS assessment period. For every assessment period, the configation and the spatial grid are predefined. Default data is included for all three sample types (bottle, pump/ferrybox, CTD). You can specify whether to use the default data or leave it out. You can also provide custom bottle samples, which will then be used instead of the default bottle data. Currently, usage of custom pump/ferrybox and CTD data are not envisaged, but can be enabled, if required. Please make sure the data you provide matches the selected assessment period. This tool represents the second part of the original HEAT assessment computation script.
HELCOM HEAT HOLAS
| Id | Title | Data Type | Description |
|---|---|---|---|
| assessment_period | Assessment Period | string | The HOLAS assessment period which is used for the HEAT analysis. It can be HOLAS-2 (2011-2016) or HOLAS-3 (2016-2021) or custom for whole monitoring period (1877-9999). Note that assessment period defines the indicators used and integrations rules, where as the sample data needs to be defined separately. Allowed values: HOLAS-2, HOLAS-3, Other. |
| bottle_data | Input samples (bottle) | string | In-situ bottle sample data (nutrients, chl-a)(StationSamplesBOT.csv). ICES Oceanographic data type 'BOT'. Write 'default' for default data. Leave out for none at all. |
| ctd_data | Input samples (CTD) | string | CTD depth profiles, relevant for oxygen debt indicator (StationSamplesCTD.csv). ICES Oceanographic data type 'CTD'. Write 'default' for default data. Leave out for none at all. |
| pump_data | Input samples (pump) | string | Ferrybox data (chl-a) (StationSamplesPMP.csv). ICES Oceanographic data type 'PMP'. Write 'default' for default data. Leave out for none at all. |
| units_gridded | Gridded assessment units | object | Grid used for confidence assessment (10k, 30k, 60k). These are generated by heat1. For default spatial units for each assessment period, write 'default'. |
| Id | Title | Description |
|---|---|---|
| station_samples | Station samples (filtered, combined) | Merged sample data of BOT, PMP and CTD data for indicator calculation (StationSamples.csv). |
| bottle_samples | Station samples (bottle), filtered | In-situ bottle sample data (nutrients, chl-a), ICES Oceanographic data type 'BOT'. Filtered by the spatial units for HOLAS assessment. This will not be used further on and is rather a by-product that you may use for progress verification. |
| pump_samples | Station samples (pump), filtered | Ferrybox data (chl-a) (StationSamplesPMP.csv), ICES Oceanographic data type 'PMP'. Filtered by the spatial units for HOLAS assessment. This will not be used further on and is rather a by-product that you may use for progress verification. |
| ctd_samples | Station samples (CTD), filtered | CTD depth profiles, relevant for oxygen debt indicator, ICES Oceanographic data type 'CTD'. Filtered by the spatial units for HOLAS assessment. This will not be used further on and is rather a by-product that you may use for progress verification. |
| units_gridded | Gridded assessment units | Grid used for confidence assessment (10k ,30k, 60k), which was used for this process. This will not be used further on and is rather a by-product that you may use for progress verification. |
Educational resources and documentation
Jobs
Browse jobsLinks
- GitHub repo for the original HEAT analysis (text/html)
- GitHub repo for the continued HEAT analysis (text/html)
- Process description as JSON (application/json)
- Process description as HTML (text/html)
- Jobs list as HTML (text/html)
- Jobs list as JSON (application/json)
- Execution for this process as JSON (application/json)
Execution modes
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